{"id":203,"date":"2016-11-28T15:22:43","date_gmt":"2016-11-28T18:22:43","guid":{"rendered":"http:\/\/sites.usp.br\/proteomics\/?page_id=203"},"modified":"2022-11-14T13:50:08","modified_gmt":"2022-11-14T16:50:08","slug":"publications","status":"publish","type":"page","link":"https:\/\/sites.usp.br\/proteomics\/en\/publications\/","title":{"rendered":"Publications"},"content":{"rendered":"2018<\/strong><\/p>\n

de Oliveira, G. S.; Kawahara, R.; Rosa-Fernandes, L.; et al. Development of a Trypanosoma cruzi strain typing assay using MS2 peptide spectral libraries (Tc-STAMS2). PLoS Negl Trop Dis\u00a0Volume: <\/span>12\u00a0Issue: <\/span>4\u00a0Pages: <\/span>e0006351. 2018<\/p>\n

Freire, C. C. M.; Palmisano, G.; Braconi, C. T.; et al. NS1 codon usage adaptation to humans in pandemic Zika virus. Mem Inst Oswaldo Cruz\u00a0Volume: <\/span>113\u00a0Issue: <\/span>5\u00a0Pages: <\/span>e170385. 2018<\/p>\n

2017<\/strong><\/p>\n

Ramirez, Marcel I.; Amorim, Maria G.; Gadelha, Catarina; et al. Technical challenges of working with extracellular vesicles. Nanoscale\u00a0Volume: <\/span>10\u00a0Issue: <\/span>3\u00a0Pages: <\/span>881-906. 2018<\/p>\n

Fernandes, L\u00edvia Rosa; Stern, Ana Carolina Bassi; de C\u00e1ssia Cavaglieri, Rita; et al. 7-Ketocholesterol overcomes drug resistance in chronic myeloid leukemia cell lines beyond MDR1 mechanism. J Proteomics\u00a0Volume: 151\u00a0Pages: 12-23. 2017<\/span><\/p>\n

Rosa-Fernandes, Livia; Rocha, Victoria Bombarda; Carregari, Victor Corasolla; et al. A Perspective on Extracellular Vesicles Proteomics. Frontiers in Chemistry\u00a0Volume: <\/span>5. 2017
\nEsteves, Eliane; Maruyama, Sandra R.; Kawahara, Rebeca; et al. Analysis of the Salivary Gland Transcriptome of Unfed and Partially Fed Amblyomma sculptum Ticks and Descriptive Proteome of the Saliva. Frontiers in Cellular and Infection Microbiology\u00a0Volume: <\/span>7. 2017<\/p>\n

Alves, Maria Julia Manso; Kawahara, Rebeca; Viner, Rosa; et al. Comprehensive glycoprofiling of the epimastigote and trypomastigote stages of Trypanosoma cruzi. J Proteomics\u00a0Volume: <\/span>151\u00a0Pages: <\/span>182-192. 2017<\/p>\n

Rosa-Fernandes, Livia; Maselli, Luciana M. P.; Maeda, Nair Y.; et al. Outside-in, inside-out: Proteomic analysis of endothelial stress mediated by 7-ketocholesterol. Chemistry and Physics of Lipids\u00a0Volume: <\/span>207\u00a0Pages: <\/span>231-238. 2017<\/p>\n

de Rezende, Eloiza; Kawahara, Rebeca; Pena, Mauricio S.; et al. Quantitative proteomic analysis of amastigotes from Leishmania (L.) amazonensis LV79 and PH8 strains reveals molecular traits associated with the virulence phenotype. Plos Neglected Tropical Diseases\u00a0Volume: <\/span>11\u00a0Issue: <\/span>11. 2017<\/p>\n

PIMENTEL, ANDR\u00c9 C.; FUZITA, FELIPE J.; Palmisano, Giuseppe; FERREIRA, CL\u00c9LIA; TERRA, WALTER R. Role of cathepsins D in the midgut of Dysdercus peruvianus. Comparative Biochemistry and Physiology. Part B: Biochemistry & Molecular Biology (Print) JCR, v. 204, p. 45-52, 2017.<\/p>\n

2016<\/strong><\/p>\n

Gilberto Santos de Oliveira; Rebeca Kawahara; Livia Rosa-Fernandes; Carla C. Avila; Martin R. Larsen; Jo\u00e3o Marcelo Pereira Alves; Giuseppe Palmisano.\u00a0Novel DNA coding regions and protein arginylation reveal unexplored T.cruzi<\/em> proteome and PTMs. International Journal of Mass Spectrometry, Accept 2016.<\/p>\n

AVILA, C. C.; ALMEIDA, F. G.; PALMISANO, G. Direct identification of trypanosomatids by matrix-assisted laser desorption ionization-time of flight mass spectrometry (DIT MALDI-TOF MS). Journal of Mass Spectrometry (Print) JCR, v. 51, p. 549-557, 2016.<\/p>\n

BOYSEN, ANDERS; Palmisano, Giuseppe; KROGH, TH\u00d8GER JENSEN; DUGGIN, IAIN G; LARSEN, MARTIN R.; M\u00d8LLER-JENSEN, JAKOB. A novel mass spectrometric strategy -BEMAP- reveals Extensive O-linked protein glycosylation in Enterotoxigenic Escherichia coli. Scientific Reports JCR, v. 6, p. 32016, 2016.<\/p>\n

FERNANDES, L\u00cdVIA ROSA; STERN, ANA CAROLINA BASSI; DE C\u00c1SSIA CAVAGLIERI, RITA; NOGUEIRA, F\u00c1BIO C\u00c9SAR SOUSA; DOMONT, GILBERTO; Palmisano, Giuseppe; BYDLOWSKI, S\u00c9RGIO PAULO. 7-Ketocholesterol overcomes drug resistance in Chronic Myeloid Leukemia cell lines beyond MDR1 mechanism. Journal of Proteomics (Print) JCR, v. 1, p. 1, 2016.<\/p>\n

ALVES, MARIA JULIA MANSO; KAWAHARA, REBECA; VINER, ROSA; COLLI, WALTER; MATTOS, ELICIANE CEVOLANI; THAYSEN-ANDERSEN, MORTEN; LARSEN, MARTIN R\u00d8SSEL; Palmisano, Giuseppe. Comprehensive glycoprofiling of the epimastigote and trypomastigote stages of Trypanosoma cruzi. Journal of Proteomics (Print) JCR, v. 1, p. 1, 2016.<\/p>\n

HUANG, HONGGANG ; HAAR PETERSEN, MARTIN; IBA\u00d1EZ-VEA, MARIA; LASSEN, PERNILLE S.; LARSEN, MARTIN R.; Palmisano, Giuseppe. Simultaneous Enrichment of Cysteine-containing Peptides and Phosphopeptides Using a Cysteine-specific Phosphonate Adaptable Tag (CysPAT) in Combination with titanium dioxide (TiO ) Chromatography. Molecular & Cellular Proteomics JCR, v. 15, p. 3282-3296, 2016.<\/p>\n

2015<\/strong><\/p>\n

MILIOLI, MARCO; IB\u00c1\u00d1EZ-VEA, MARIA; SIDOLI, SIMONE; Palmisano, Giuseppe; CARERI, MARIA; LARSEN, MARTIN R. Quantitative proteomics analysis of platelet-derived microparticles reveals distinct protein signatures when stimulated by different physiological agonists. Journal of Proteomics (Print) JCR, v. 121, p. 56-66, 2015.<\/p>\n

YANG, FEN; LI, WANSHUN; DERBYSHIRE, MARK; LARSEN, MARTIN R; RUDD, JASON J; Palmisano, Giuseppe. Unraveling incompatibility between wheat and the fungal pathogen Zymoseptoria tritici through apoplastic proteomics. BMC Genomics JCR, v. 16, p. 362, 2015.<\/p>\n

GABRIEL, HELOISA B.; DE AZEVEDO, MAURO F.; Palmisano, Giuseppe; WUNDERLICH, GERHARD; KIMURA, EM\u00cdLIA A.; KATZIN, ALEJANDRO M; ALVES, JO\u00c3O M. P. Single-target high-throughput transcription analyses reveal high levels of alternative splicing present in the FPPS\/GGPPS from Plasmodium falciparum. Scientific Reports JCR, v. 5, p. 18429, 2015.<\/p>\n

LI, HAIYING; RASMUSSEN, MORTEN I; LARSEN, MARTIN R; GUO, YAO; JERS, CARSTEN; Palmisano, Giuseppe; MIKKELSEN, J\u00d8RN D; KIRPEKAR, FINN. Automated -glycan profiling of a mutant sialidase expressed in, using tandem mass spectrometry and bioinformatics. Glycobiology (Oxford) JCR, v. 25, p. 1350-1361, 2015.<\/p>\n

2014<\/strong><\/p>\n

MELO-BRAGA, M. N.; SCHULZ, M.; LIU, Q.; SWISTOWSKI, A.; PALMISANO, G.; ENGHOLM-KELLER, K.; JAKOBSEN, L.; ZENG, X.; LARSEN, M. R. Comprehensive Quantitative Comparison of the Membrane Proteome, Phosphoproteome, and Sialiome of Human Embryonic and Neural Stem Cells. Molecular & Cellular Proteomics JCR, v. 13, p. 311-328, 2014.<\/p>\n

HUANG, HONGGANG; LARSEN, MARTIN R.; Palmisano, Giuseppe; DAI, JIE; LAMETSCH, REN\u00c9. Quantitative phosphoproteomic analysis of porcine muscle within 24h postmortem. Journal of Proteomics (Print) JCR, v. 106, p. 125-139, 2014.<\/p>\n

2018<\/strong><\/p>\n

de Oliveira, G. S.; Kawahara, R.; Rosa-Fernandes, L.; et al. Development of a Trypanosoma cruzi strain typing assay using MS2 peptide spectral libraries (Tc-STAMS2). PLoS Negl Trop Dis\u00a0Volume: <\/span>12\u00a0Issue: <\/span>4\u00a0Pages: <\/span>e0006351. 2018<\/p>\n

Freire, C. C. M.; Palmisano, G.; Braconi, C. T.; et al. NS1 codon usage adaptation to humans in pandemic Zika virus. Mem Inst Oswaldo Cruz\u00a0Volume: <\/span>113\u00a0Issue: <\/span>5\u00a0Pages: <\/span>e170385. 2018<\/p>\n

2017<\/strong><\/p>\n

Ramirez, Marcel I.; Amorim, Maria G.; Gadelha, Catarina; et al. Technical challenges of working with extracellular vesicles. Nanoscale\u00a0Volume: <\/span>10\u00a0Issue: <\/span>3\u00a0Pages: <\/span>881-906. 2018<\/p>\n

Fernandes, L\u00edvia Rosa; Stern, Ana Carolina Bassi; de C\u00e1ssia Cavaglieri, Rita; et al. 7-Ketocholesterol overcomes drug resistance in chronic myeloid leukemia cell lines beyond MDR1 mechanism. J Proteomics\u00a0Volume: 151\u00a0Pages: 12-23. 2017<\/span><\/p>\n

Rosa-Fernandes, Livia; Rocha, Victoria Bombarda; Carregari, Victor Corasolla; et al. A Perspective on Extracellular Vesicles Proteomics. Frontiers in Chemistry\u00a0Volume: <\/span>5. 2017
\nEsteves, Eliane; Maruyama, Sandra R.; Kawahara, Rebeca; et al. Analysis of the Salivary Gland Transcriptome of Unfed and Partially Fed Amblyomma sculptum Ticks and Descriptive Proteome of the Saliva. Frontiers in Cellular and Infection Microbiology\u00a0Volume: <\/span>7. 2017<\/p>\n

Alves, Maria Julia Manso; Kawahara, Rebeca; Viner, Rosa; et al. Comprehensive glycoprofiling of the epimastigote and trypomastigote stages of Trypanosoma cruzi. J Proteomics\u00a0Volume: <\/span>151\u00a0Pages: <\/span>182-192. 2017<\/p>\n

Rosa-Fernandes, Livia; Maselli, Luciana M. P.; Maeda, Nair Y.; et al. Outside-in, inside-out: Proteomic analysis of endothelial stress mediated by 7-ketocholesterol. Chemistry and Physics of Lipids\u00a0Volume: <\/span>207\u00a0Pages: <\/span>231-238. 2017<\/p>\n

de Rezende, Eloiza; Kawahara, Rebeca; Pena, Mauricio S.; et al. Quantitative proteomic analysis of amastigotes from Leishmania (L.) amazonensis LV79 and PH8 strains reveals molecular traits associated with the virulence phenotype. Plos Neglected Tropical Diseases\u00a0Volume: <\/span>11\u00a0Issue: <\/span>11. 2017<\/p>\n

PIMENTEL, ANDR\u00c9 C.; FUZITA, FELIPE J.; Palmisano, Giuseppe; FERREIRA, CL\u00c9LIA; TERRA, WALTER R. Role of cathepsins D in the midgut of Dysdercus peruvianus. Comparative Biochemistry and Physiology. Part B: Biochemistry & Molecular Biology (Print) JCR, v. 204, p. 45-52, 2017.<\/p>\n

2016<\/strong><\/p>\n

Gilberto Santos de Oliveira; Rebeca Kawahara; Livia Rosa-Fernandes; Carla C. Avila; Martin R. Larsen; Jo\u00e3o Marcelo Pereira Alves; Giuseppe Palmisano.\u00a0Novel DNA coding regions and protein arginylation reveal unexplored T.cruzi<\/em> proteome and PTMs. International Journal of Mass Spectrometry, Accept 2016.<\/p>\n

AVILA, C. C.; ALMEIDA, F. G.; PALMISANO, G. Direct identification of trypanosomatids by matrix-assisted laser desorption ionization-time of flight mass spectrometry (DIT MALDI-TOF MS). Journal of Mass Spectrometry (Print) JCR, v. 51, p. 549-557, 2016.<\/p>\n

BOYSEN, ANDERS; Palmisano, Giuseppe; KROGH, TH\u00d8GER JENSEN; DUGGIN, IAIN G; LARSEN, MARTIN R.; M\u00d8LLER-JENSEN, JAKOB. A novel mass spectrometric strategy -BEMAP- reveals Extensive O-linked protein glycosylation in Enterotoxigenic Escherichia coli. Scientific Reports JCR, v. 6, p. 32016, 2016.<\/p>\n

FERNANDES, L\u00cdVIA ROSA; STERN, ANA CAROLINA BASSI; DE C\u00c1SSIA CAVAGLIERI, RITA; NOGUEIRA, F\u00c1BIO C\u00c9SAR SOUSA; DOMONT, GILBERTO; Palmisano, Giuseppe; BYDLOWSKI, S\u00c9RGIO PAULO. 7-Ketocholesterol overcomes drug resistance in Chronic Myeloid Leukemia cell lines beyond MDR1 mechanism. Journal of Proteomics (Print) JCR, v. 1, p. 1, 2016.<\/p>\n

ALVES, MARIA JULIA MANSO; KAWAHARA, REBECA; VINER, ROSA; COLLI, WALTER; MATTOS, ELICIANE CEVOLANI; THAYSEN-ANDERSEN, MORTEN; LARSEN, MARTIN R\u00d8SSEL; Palmisano, Giuseppe. Comprehensive glycoprofiling of the epimastigote and trypomastigote stages of Trypanosoma cruzi. Journal of Proteomics (Print) JCR, v. 1, p. 1, 2016.<\/p>\n

HUANG, HONGGANG ; HAAR PETERSEN, MARTIN; IBA\u00d1EZ-VEA, MARIA; LASSEN, PERNILLE S.; LARSEN, MARTIN R.; Palmisano, Giuseppe. Simultaneous Enrichment of Cysteine-containing Peptides and Phosphopeptides Using a Cysteine-specific Phosphonate Adaptable Tag (CysPAT) in Combination with titanium dioxide (TiO ) Chromatography. Molecular & Cellular Proteomics JCR, v. 15, p. 3282-3296, 2016.<\/p>\n

2015<\/strong><\/p>\n

MILIOLI, MARCO; IB\u00c1\u00d1EZ-VEA, MARIA; SIDOLI, SIMONE; Palmisano, Giuseppe; CARERI, MARIA; LARSEN, MARTIN R. Quantitative proteomics analysis of platelet-derived microparticles reveals distinct protein signatures when stimulated by different physiological agonists. Journal of Proteomics (Print) JCR, v. 121, p. 56-66, 2015.<\/p>\n

YANG, FEN; LI, WANSHUN; DERBYSHIRE, MARK; LARSEN, MARTIN R; RUDD, JASON J; Palmisano, Giuseppe. Unraveling incompatibility between wheat and the fungal pathogen Zymoseptoria tritici through apoplastic proteomics. BMC Genomics JCR, v. 16, p. 362, 2015.<\/p>\n

GABRIEL, HELOISA B.; DE AZEVEDO, MAURO F.; Palmisano, Giuseppe; WUNDERLICH, GERHARD; KIMURA, EM\u00cdLIA A.; KATZIN, ALEJANDRO M; ALVES, JO\u00c3O M. P. Single-target high-throughput transcription analyses reveal high levels of alternative splicing present in the FPPS\/GGPPS from Plasmodium falciparum. Scientific Reports JCR, v. 5, p. 18429, 2015.<\/p>\n

LI, HAIYING; RASMUSSEN, MORTEN I; LARSEN, MARTIN R; GUO, YAO; JERS, CARSTEN; Palmisano, Giuseppe; MIKKELSEN, J\u00d8RN D; KIRPEKAR, FINN. Automated -glycan profiling of a mutant sialidase expressed in, using tandem mass spectrometry and bioinformatics. Glycobiology (Oxford) JCR, v. 25, p. 1350-1361, 2015.<\/p>\n

2014<\/strong><\/p>\n

MELO-BRAGA, M. N.; SCHULZ, M.; LIU, Q.; SWISTOWSKI, A.; PALMISANO, G.; ENGHOLM-KELLER, K.; JAKOBSEN, L.; ZENG, X.; LARSEN, M. R. Comprehensive Quantitative Comparison of the Membrane Proteome, Phosphoproteome, and Sialiome of Human Embryonic and Neural Stem Cells. Molecular & Cellular Proteomics JCR, v. 13, p. 311-328, 2014.<\/p>\n

HUANG, HONGGANG; LARSEN, MARTIN R.; Palmisano, Giuseppe; DAI, JIE; LAMETSCH, REN\u00c9. Quantitative phosphoproteomic analysis of porcine muscle within 24h postmortem. Journal of Proteomics (Print) JCR, v. 106, p. 125-139, 2014.","protected":false},"excerpt":{"rendered":"

2018 de Oliveira, G. S.; Kawahara, R.; Rosa-Fernandes, L.; et al. Development of a Trypanosoma cruzi strain typing assay using MS2 peptide spectral libraries (Tc-STAMS2). PLoS Negl Trop Dis\u00a0Volume: 12\u00a0Issue: 4\u00a0Pages: e0006351. 2018 Freire, C. C. M.; Palmisano, G.; Braconi, … Continue reading →<\/span><\/a><\/p>\n","protected":false},"author":91,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":"","_links_to":"","_links_to_target":""},"class_list":["post-203","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/sites.usp.br\/proteomics\/en\/wp-json\/wp\/v2\/pages\/203","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/sites.usp.br\/proteomics\/en\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/sites.usp.br\/proteomics\/en\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/sites.usp.br\/proteomics\/en\/wp-json\/wp\/v2\/users\/91"}],"replies":[{"embeddable":true,"href":"https:\/\/sites.usp.br\/proteomics\/en\/wp-json\/wp\/v2\/comments?post=203"}],"version-history":[{"count":4,"href":"https:\/\/sites.usp.br\/proteomics\/en\/wp-json\/wp\/v2\/pages\/203\/revisions"}],"predecessor-version":[{"id":1283,"href":"https:\/\/sites.usp.br\/proteomics\/en\/wp-json\/wp\/v2\/pages\/203\/revisions\/1283"}],"wp:attachment":[{"href":"https:\/\/sites.usp.br\/proteomics\/en\/wp-json\/wp\/v2\/media?parent=203"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}