Publications

2018

de Oliveira, G. S.; Kawahara, R.; Rosa-Fernandes, L.; et al. Development of a Trypanosoma cruzi strain typing assay using MS2 peptide spectral libraries (Tc-STAMS2). PLoS Negl Trop Dis Volume: 12 Issue: Pages: e0006351. 2018

Freire, C. C. M.; Palmisano, G.; Braconi, C. T.; et al. NS1 codon usage adaptation to humans in pandemic Zika virus. Mem Inst Oswaldo Cruz Volume: 113 Issue: Pages: e170385. 2018

2017

Ramirez, Marcel I.; Amorim, Maria G.; Gadelha, Catarina; et al. Technical challenges of working with extracellular vesicles. Nanoscale Volume: 10 Issue: Pages: 881-906. 2018

Fernandes, Lívia Rosa; Stern, Ana Carolina Bassi; de Cássia Cavaglieri, Rita; et al. 7-Ketocholesterol overcomes drug resistance in chronic myeloid leukemia cell lines beyond MDR1 mechanism. J Proteomics Volume: 151 Pages: 12-23. 2017

Rosa-Fernandes, Livia; Rocha, Victoria Bombarda; Carregari, Victor Corasolla; et al. A Perspective on Extracellular Vesicles Proteomics. Frontiers in Chemistry Volume: 5. 2017
Esteves, Eliane; Maruyama, Sandra R.; Kawahara, Rebeca; et al. Analysis of the Salivary Gland Transcriptome of Unfed and Partially Fed Amblyomma sculptum Ticks and Descriptive Proteome of the Saliva. Frontiers in Cellular and Infection Microbiology Volume: 7. 2017

Alves, Maria Julia Manso; Kawahara, Rebeca; Viner, Rosa; et al. Comprehensive glycoprofiling of the epimastigote and trypomastigote stages of Trypanosoma cruzi. J Proteomics Volume: 151 Pages: 182-192. 2017

Rosa-Fernandes, Livia; Maselli, Luciana M. P.; Maeda, Nair Y.; et al. Outside-in, inside-out: Proteomic analysis of endothelial stress mediated by 7-ketocholesterol. Chemistry and Physics of Lipids Volume: 207 Pages: 231-238. 2017

de Rezende, Eloiza; Kawahara, Rebeca; Pena, Mauricio S.; et al. Quantitative proteomic analysis of amastigotes from Leishmania (L.) amazonensis LV79 and PH8 strains reveals molecular traits associated with the virulence phenotype. Plos Neglected Tropical Diseases Volume: 11 Issue: 11. 2017

PIMENTEL, ANDRÉ C.; FUZITA, FELIPE J.; Palmisano, Giuseppe; FERREIRA, CLÉLIA; TERRA, WALTER R. Role of cathepsins D in the midgut of Dysdercus peruvianus. Comparative Biochemistry and Physiology. Part B: Biochemistry & Molecular Biology (Print) JCR, v. 204, p. 45-52, 2017.

2016

Gilberto Santos de Oliveira; Rebeca Kawahara; Livia Rosa-Fernandes; Carla C. Avila; Martin R. Larsen; João Marcelo Pereira Alves; Giuseppe Palmisano. Novel DNA coding regions and protein arginylation reveal unexplored T.cruzi proteome and PTMs. International Journal of Mass Spectrometry, Accept 2016.

AVILA, C. C.; ALMEIDA, F. G.; PALMISANO, G. Direct identification of trypanosomatids by matrix-assisted laser desorption ionization-time of flight mass spectrometry (DIT MALDI-TOF MS). Journal of Mass Spectrometry (Print) JCR, v. 51, p. 549-557, 2016.

BOYSEN, ANDERS; Palmisano, Giuseppe; KROGH, THØGER JENSEN; DUGGIN, IAIN G; LARSEN, MARTIN R.; MØLLER-JENSEN, JAKOB. A novel mass spectrometric strategy -BEMAP- reveals Extensive O-linked protein glycosylation in Enterotoxigenic Escherichia coli. Scientific Reports JCR, v. 6, p. 32016, 2016.

FERNANDES, LÍVIA ROSA; STERN, ANA CAROLINA BASSI; DE CÁSSIA CAVAGLIERI, RITA; NOGUEIRA, FÁBIO CÉSAR SOUSA; DOMONT, GILBERTO; Palmisano, Giuseppe; BYDLOWSKI, SÉRGIO PAULO. 7-Ketocholesterol overcomes drug resistance in Chronic Myeloid Leukemia cell lines beyond MDR1 mechanism. Journal of Proteomics (Print) JCR, v. 1, p. 1, 2016.

ALVES, MARIA JULIA MANSO; KAWAHARA, REBECA; VINER, ROSA; COLLI, WALTER; MATTOS, ELICIANE CEVOLANI; THAYSEN-ANDERSEN, MORTEN; LARSEN, MARTIN RØSSEL; Palmisano, Giuseppe. Comprehensive glycoprofiling of the epimastigote and trypomastigote stages of Trypanosoma cruzi. Journal of Proteomics (Print) JCR, v. 1, p. 1, 2016.

HUANG, HONGGANG ; HAAR PETERSEN, MARTIN; IBAÑEZ-VEA, MARIA; LASSEN, PERNILLE S.; LARSEN, MARTIN R.; Palmisano, Giuseppe. Simultaneous Enrichment of Cysteine-containing Peptides and Phosphopeptides Using a Cysteine-specific Phosphonate Adaptable Tag (CysPAT) in Combination with titanium dioxide (TiO ) Chromatography. Molecular & Cellular Proteomics JCR, v. 15, p. 3282-3296, 2016.

2015

MILIOLI, MARCO; IBÁÑEZ-VEA, MARIA; SIDOLI, SIMONE; Palmisano, Giuseppe; CARERI, MARIA; LARSEN, MARTIN R. Quantitative proteomics analysis of platelet-derived microparticles reveals distinct protein signatures when stimulated by different physiological agonists. Journal of Proteomics (Print) JCR, v. 121, p. 56-66, 2015.

YANG, FEN; LI, WANSHUN; DERBYSHIRE, MARK; LARSEN, MARTIN R; RUDD, JASON J; Palmisano, Giuseppe. Unraveling incompatibility between wheat and the fungal pathogen Zymoseptoria tritici through apoplastic proteomics. BMC Genomics JCR, v. 16, p. 362, 2015.

GABRIEL, HELOISA B.; DE AZEVEDO, MAURO F.; Palmisano, Giuseppe; WUNDERLICH, GERHARD; KIMURA, EMÍLIA A.; KATZIN, ALEJANDRO M; ALVES, JOÃO M. P. Single-target high-throughput transcription analyses reveal high levels of alternative splicing present in the FPPS/GGPPS from Plasmodium falciparum. Scientific Reports JCR, v. 5, p. 18429, 2015.

LI, HAIYING; RASMUSSEN, MORTEN I; LARSEN, MARTIN R; GUO, YAO; JERS, CARSTEN; Palmisano, Giuseppe; MIKKELSEN, JØRN D; KIRPEKAR, FINN. Automated -glycan profiling of a mutant sialidase expressed in, using tandem mass spectrometry and bioinformatics. Glycobiology (Oxford) JCR, v. 25, p. 1350-1361, 2015.

2014

MELO-BRAGA, M. N.; SCHULZ, M.; LIU, Q.; SWISTOWSKI, A.; PALMISANO, G.; ENGHOLM-KELLER, K.; JAKOBSEN, L.; ZENG, X.; LARSEN, M. R. Comprehensive Quantitative Comparison of the Membrane Proteome, Phosphoproteome, and Sialiome of Human Embryonic and Neural Stem Cells. Molecular & Cellular Proteomics JCR, v. 13, p. 311-328, 2014.

HUANG, HONGGANG; LARSEN, MARTIN R.; Palmisano, Giuseppe; DAI, JIE; LAMETSCH, RENÉ. Quantitative phosphoproteomic analysis of porcine muscle within 24h postmortem. Journal of Proteomics (Print) JCR, v. 106, p. 125-139, 2014.

2018

de Oliveira, G. S.; Kawahara, R.; Rosa-Fernandes, L.; et al. Development of a Trypanosoma cruzi strain typing assay using MS2 peptide spectral libraries (Tc-STAMS2). PLoS Negl Trop Dis Volume: 12 Issue: Pages: e0006351. 2018

Freire, C. C. M.; Palmisano, G.; Braconi, C. T.; et al. NS1 codon usage adaptation to humans in pandemic Zika virus. Mem Inst Oswaldo Cruz Volume: 113 Issue: Pages: e170385. 2018

2017

Ramirez, Marcel I.; Amorim, Maria G.; Gadelha, Catarina; et al. Technical challenges of working with extracellular vesicles. Nanoscale Volume: 10 Issue: Pages: 881-906. 2018

Fernandes, Lívia Rosa; Stern, Ana Carolina Bassi; de Cássia Cavaglieri, Rita; et al. 7-Ketocholesterol overcomes drug resistance in chronic myeloid leukemia cell lines beyond MDR1 mechanism. J Proteomics Volume: 151 Pages: 12-23. 2017

Rosa-Fernandes, Livia; Rocha, Victoria Bombarda; Carregari, Victor Corasolla; et al. A Perspective on Extracellular Vesicles Proteomics. Frontiers in Chemistry Volume: 5. 2017
Esteves, Eliane; Maruyama, Sandra R.; Kawahara, Rebeca; et al. Analysis of the Salivary Gland Transcriptome of Unfed and Partially Fed Amblyomma sculptum Ticks and Descriptive Proteome of the Saliva. Frontiers in Cellular and Infection Microbiology Volume: 7. 2017

Alves, Maria Julia Manso; Kawahara, Rebeca; Viner, Rosa; et al. Comprehensive glycoprofiling of the epimastigote and trypomastigote stages of Trypanosoma cruzi. J Proteomics Volume: 151 Pages: 182-192. 2017

Rosa-Fernandes, Livia; Maselli, Luciana M. P.; Maeda, Nair Y.; et al. Outside-in, inside-out: Proteomic analysis of endothelial stress mediated by 7-ketocholesterol. Chemistry and Physics of Lipids Volume: 207 Pages: 231-238. 2017

de Rezende, Eloiza; Kawahara, Rebeca; Pena, Mauricio S.; et al. Quantitative proteomic analysis of amastigotes from Leishmania (L.) amazonensis LV79 and PH8 strains reveals molecular traits associated with the virulence phenotype. Plos Neglected Tropical Diseases Volume: 11 Issue: 11. 2017

PIMENTEL, ANDRÉ C.; FUZITA, FELIPE J.; Palmisano, Giuseppe; FERREIRA, CLÉLIA; TERRA, WALTER R. Role of cathepsins D in the midgut of Dysdercus peruvianus. Comparative Biochemistry and Physiology. Part B: Biochemistry & Molecular Biology (Print) JCR, v. 204, p. 45-52, 2017.

2016

Gilberto Santos de Oliveira; Rebeca Kawahara; Livia Rosa-Fernandes; Carla C. Avila; Martin R. Larsen; João Marcelo Pereira Alves; Giuseppe Palmisano. Novel DNA coding regions and protein arginylation reveal unexplored T.cruzi proteome and PTMs. International Journal of Mass Spectrometry, Accept 2016.

AVILA, C. C.; ALMEIDA, F. G.; PALMISANO, G. Direct identification of trypanosomatids by matrix-assisted laser desorption ionization-time of flight mass spectrometry (DIT MALDI-TOF MS). Journal of Mass Spectrometry (Print) JCR, v. 51, p. 549-557, 2016.

BOYSEN, ANDERS; Palmisano, Giuseppe; KROGH, THØGER JENSEN; DUGGIN, IAIN G; LARSEN, MARTIN R.; MØLLER-JENSEN, JAKOB. A novel mass spectrometric strategy -BEMAP- reveals Extensive O-linked protein glycosylation in Enterotoxigenic Escherichia coli. Scientific Reports JCR, v. 6, p. 32016, 2016.

FERNANDES, LÍVIA ROSA; STERN, ANA CAROLINA BASSI; DE CÁSSIA CAVAGLIERI, RITA; NOGUEIRA, FÁBIO CÉSAR SOUSA; DOMONT, GILBERTO; Palmisano, Giuseppe; BYDLOWSKI, SÉRGIO PAULO. 7-Ketocholesterol overcomes drug resistance in Chronic Myeloid Leukemia cell lines beyond MDR1 mechanism. Journal of Proteomics (Print) JCR, v. 1, p. 1, 2016.

ALVES, MARIA JULIA MANSO; KAWAHARA, REBECA; VINER, ROSA; COLLI, WALTER; MATTOS, ELICIANE CEVOLANI; THAYSEN-ANDERSEN, MORTEN; LARSEN, MARTIN RØSSEL; Palmisano, Giuseppe. Comprehensive glycoprofiling of the epimastigote and trypomastigote stages of Trypanosoma cruzi. Journal of Proteomics (Print) JCR, v. 1, p. 1, 2016.

HUANG, HONGGANG ; HAAR PETERSEN, MARTIN; IBAÑEZ-VEA, MARIA; LASSEN, PERNILLE S.; LARSEN, MARTIN R.; Palmisano, Giuseppe. Simultaneous Enrichment of Cysteine-containing Peptides and Phosphopeptides Using a Cysteine-specific Phosphonate Adaptable Tag (CysPAT) in Combination with titanium dioxide (TiO ) Chromatography. Molecular & Cellular Proteomics JCR, v. 15, p. 3282-3296, 2016.

2015

MILIOLI, MARCO; IBÁÑEZ-VEA, MARIA; SIDOLI, SIMONE; Palmisano, Giuseppe; CARERI, MARIA; LARSEN, MARTIN R. Quantitative proteomics analysis of platelet-derived microparticles reveals distinct protein signatures when stimulated by different physiological agonists. Journal of Proteomics (Print) JCR, v. 121, p. 56-66, 2015.

YANG, FEN; LI, WANSHUN; DERBYSHIRE, MARK; LARSEN, MARTIN R; RUDD, JASON J; Palmisano, Giuseppe. Unraveling incompatibility between wheat and the fungal pathogen Zymoseptoria tritici through apoplastic proteomics. BMC Genomics JCR, v. 16, p. 362, 2015.

GABRIEL, HELOISA B.; DE AZEVEDO, MAURO F.; Palmisano, Giuseppe; WUNDERLICH, GERHARD; KIMURA, EMÍLIA A.; KATZIN, ALEJANDRO M; ALVES, JOÃO M. P. Single-target high-throughput transcription analyses reveal high levels of alternative splicing present in the FPPS/GGPPS from Plasmodium falciparum. Scientific Reports JCR, v. 5, p. 18429, 2015.

LI, HAIYING; RASMUSSEN, MORTEN I; LARSEN, MARTIN R; GUO, YAO; JERS, CARSTEN; Palmisano, Giuseppe; MIKKELSEN, JØRN D; KIRPEKAR, FINN. Automated -glycan profiling of a mutant sialidase expressed in, using tandem mass spectrometry and bioinformatics. Glycobiology (Oxford) JCR, v. 25, p. 1350-1361, 2015.

2014

MELO-BRAGA, M. N.; SCHULZ, M.; LIU, Q.; SWISTOWSKI, A.; PALMISANO, G.; ENGHOLM-KELLER, K.; JAKOBSEN, L.; ZENG, X.; LARSEN, M. R. Comprehensive Quantitative Comparison of the Membrane Proteome, Phosphoproteome, and Sialiome of Human Embryonic and Neural Stem Cells. Molecular & Cellular Proteomics JCR, v. 13, p. 311-328, 2014.

HUANG, HONGGANG; LARSEN, MARTIN R.; Palmisano, Giuseppe; DAI, JIE; LAMETSCH, RENÉ. Quantitative phosphoproteomic analysis of porcine muscle within 24h postmortem. Journal of Proteomics (Print) JCR, v. 106, p. 125-139, 2014.